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Infection and Global Health Research Division

Research at the University of St Andrews School of Medicine

 

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Infection and Global Health Medicine Research Division recent research publications

100 (of 613 /dk/atira/pure/researchoutput/status/published available) for Infection and Global Health Division (source: University of St Andrews PURE)
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Combined quantitative tuberculosis biomarker model for time-to-positivity and colony forming unit to support tuberculosis drug development Rami Ayoun Alsoud, Robin J. Svensson, Elin M. Svensson, Stephen Henry Gillespie, Martin J. Boeree, Andreas H. Diacon, Rodney Dawson, Rob E. Aarnoutse, Ulrika S. H. Simonsson
Frontiers in Pharmacology 2023 vol. 14
A comparison of clinical outcomes among people living with HIV of different age groups attending Queen Elizabeth Central Hospital Outpatient ART Clinic in Malawi Jessica Chakakala-Chaziya, Noel Patson, Vincent Samuel, John Mbotwa, Danilo Buonsenso, Master Chisale, Eddie Phiri, Bernadette Ann-Marie O'Hare
Frontiers in Medicine 2023 vol. 10
Investigation of hospital discharge cases and SARS-CoV-2 introduction into Lothian care homes S Cotton, Martin Patrick McHugh, R Dewar, J G Haas, K Templeton,
Journal of Hospital Infection 2023 vol. 135 pp. 28-36
Trial-of-antibiotics to assist tuberculosis diagnosis in symptomatic adults in Malawi (ACT-TB study) Titus H Divala, Elizabeth L Corbett, Chikondi Kandulu, Brewster Moyo, Peter MacPherson, Marriott Nliwasa, Neil French, Derek James Sloan, Lingstone Chiume, Masiye John Ndaferankhande, Sanderson Chilanga, Sabina Tazirwa Majiga, Jon Øyvind Odland, Katherine L Fielding
The Lancet Global Health 2023 vol. 11 pp. e556-e565
Improving outcomes for multidrug-resistant TB Stephen Henry Gillespie
International Journal of Tuberculosis and Lung Disease 2023 vol. 27 pp. 1-2
The role of multidimensional poverty in antibiotic misuse Dominique LaShari Green, Katherine Lisa Keenan, Kathryn Jean Fredricks, Sarah Insia Huque, Martha F Mushi, Catherine Kansiime, Benon Asiimwe, John Kiiru, Stephen Mshana, Stella Neema, Joseph R Mwanga, Mike Kesby, Andy Lynch, Hannah Worthington, Emmanuel Olawale Olamijuwon, Mary Abed Al Ahad, Annette Aduda, John Mwaniki Njeru, Blandina T Mmbaga, Joel Bazira, Alison Fiona Sandeman, John Stelling, Stephen Henry Gillespie, Gibson Kibiki, Wilber Sabiiti, Derek James Sloan, Matthew Holden, V Anne Smith, Arun Decano, Antonio Maldonado-Barragan, David Aanensen, Nyanda E Ntinginya, Alison Elliott,
The Lancet Global Health 2023 vol. 11 pp. e59-e68
Comparing additionality of tuberculosis cases using GeneXpert or smear-based active TB case-finding strategies among social contacts of index cases in Nepal Suman C. Gurung, Kritika Dixit, Rajan Paudel, Manoj K. Sah, Ram N. Pandit, Tara P. Aryal, Shikha U. Khatiwada, Govind Majhi, Raghu Dhital, Puskar R. Paudel, Gyanendra Shrestha, Bhola Rai, Gangaram Budhathoki, Mukti Khanal, Gokul Mishra, Jens Levy, Job Van de Rest, Anchal Thapa, Andrew Ramsay, Stephen B. Squire, Knut Lönnroth, Buddha Basnyat, Maxine Caws
Tropical Medicine and Infectious Disease 2023 vol. 8
A model to explain the impact of government revenue on the quality of governance and the SDGs Stephen Hall, Bernadette Ann-Marie O'Hare
Economies 2023 vol. 11
How can corporate taxes contribute to sub-Saharan Africa's Sustainable Development Goals (SDGs)? Eilish Anne Hannah, Bernadette Ann-Marie O'Hare, Marisol Lopez, Stuart William Murray, Rachel Etter-Phoya, Stephen Hall, Michael Masiya
Globalization and Health 2023 vol. 19
Implementation of evidence-based multiple focus integrated intensified TB screening to end TB (EXIT-TB) package in East Africa Kahabi Isangula, Doreen Philbert, Florence Ngari, Tigest Ajeme, Godfather Kimaro, Getnet Yimer, Nicholaus P. Mnyambwa, Winters Muttamba, Irene Najjingo, Aman Wilfred, Johnson Mshiu, Bruce Kirenga, Steve Wandiga, Blandina Theophil Mmbaga, Francis Donard, Douglas Okelloh, Benson Mtesha, Hussen Mohammed, Hadija Semvua, James Ngocho, Sayoki Mfinanga, Esther Ngadaya
BMC Infectious Diseases 2023 vol. 23
Bacterial etiology of urinary tract infections in patients treated at Kenyan health facilities and their resistance towards commonly used antibiotics Susan Kiiru, John Maina, Japhet Katana, John Mwaniki, Benon B. Asiimwe, Stephen E. Mshana, Katherine Lisa Keenan, Stephen Henry Gillespie, John Stelling, Matthew Holden, HATUA Consortium, John Kiiru
PLoS ONE 2023 vol. 18
Association of fluvoxamine with mortality and symptom resolution among inpatients with COVID-19 in Uganda Bruce J Kirenga, Levicatus Mugenyi, Marina Sánchez-Rico, Henry Kyobe, Winters Muttamba, Raymond Mugume, Eliya Mwesigwa, Ezra Kalimo, Vicky Nyombi, Ivan Segawa, Loryndah Olive Namakula, Rogers Sekibira, Wilberforce Kabweru, Rosemary Byanyima, Hellen Aanyu, Pauline Byakika-Kibwika, Henry G Mwebesa, Nicolas Hoertel, William Bazeyo
Molecular Psychiatry 2023
A hybrid individual-based mathematical model to study bladder infections Anas Lasri Doukkali, Tommaso Lorenzi, Jennifer L. Rohn, Ruth Bowness
Frontiers in Applied Mathematics and Statistics 2023 vol. 9
Comparison of Lymphocyte-CRP ratio to conventional inflammatory markers for predicting clinical outcomes in COVID-19 Robert Hammond, Kenneth Chan, Chukwugozie Chukwuenweniwe, Rebecca Johnson, Duaa Khair, Eleanor Duck, Oluwaseun Olubodun, Kristian Barwick, Winston Banya, James Stirrup, Peter Duncan Donnelly, Juan Carlos Kaski, Anthony R Coates
Journal of Personalized Medicine 2023 vol. 13
Low CRB-65 scores effectively rule out adverse clinical outcomes in COVID-19 irrespective of chest radiographic abnormalities Robert Hammond, Kenneth Chan, Chukwugozie Chukwuenweniwe, Rebecca Johnson, Duaa Khair, Eleanor Duck, Oluwaseun Olubodun, Kirstian Barwick, Winston Banya, James Stirrup, Peter Duncan Donnelly, Juan Carlos Kaski, Anthony R M Coates
Biomedicines 2023 vol. 11
Normal high-sensitivity cardiac troponin for ruling-out inpatient mortality in acute COVID-19 Robert Hammond, Kenneth Chan, Chukwugozie Chukwuenweniwe, Rebecca Johnson, Duaa Khair, Eleanor Duck, Oluwaseun Olubodun, Kristian Barwick, Winston Banya, James Stirrup, Peter Duncan Donnelly, Juan Carlos Kaski, Anthony R. M. Coates
PLoS ONE 2023 vol. 18
Evaluation of the diagnostic performance of the urine dipstick test for the detection of urinary tract infections in patients treated in Kenyan hospitals John Maina, John Mwaniki, Franklin Mwiti, Susan Kiiru, Japhet Katana, Fredrick Wanja, Joel Mukaya, Osborn Khasabuli, Benon Asiimwe, Stephen Henry Gillespie, John Stelling, Stephen Mshana, Matthew Holden, Wilber Sabiiti, John Kiiru
Access Microbiology 2023 vol. 5
Building sustainable clinical trial sites in Sub-Saharan Africa through networking, infrastructure improvement, training and conducting clinical studies Anna-Maria Mekota, Stephen Henry Gillespie, Michael Hoelscher, Andreas H. Diacon, Rodney Dawson, Gavin Churchyard, Ian Sanne, Lilian Minja, Gibson Kibiki, Leonard Maboko, Shabir Lakhi, Moses Joloba, Abraham Alabi, Bruce Kirenga, Timothy D. McHugh, Martin P. Grobusch, Martin J. Boeree
Acta Tropica 2023 vol. 238
Genomic investigations of unexplained acute hepatitis in children Sofia Morfopoulou, Sarah Buddle, Oscar Enrique Torres Montaguth, Laura Atkinson, José Afonso Guerra-Assunção, Mahdi Moradi Marjaneh, Riccardo Zenezini Chiozzi, Nathaniel Storey, Luis Campos, J. Ciaran Hutchinson, John R. Counsell, Gabriele Pollara, Sunando Roy, Cristina Venturini, Juan F. Antinao Diaz, Ala’a Siam, Luke J. Tappouni, Zeinab Asgarian, Joanne Ng, Killian S. Hanlon, Alexander Lennon, Andrew McArdle, Agata Czap, Joshua Rosenheim, Catarina Andrade, Glenn Anderson, Jack C. D. Lee, Rachel Williams, Charlotte A. Williams, Helena Tutill, Nadua Bayzid, Luz Marina Martin Bernal, Hannah Macpherson, Kylie-Ann Montgomery, Catherine Moore, Kate Templeton, Claire Neill, Matthew Holden, Rory Gunson, Samantha J. Shepherd, Priyen Shah, Samantha Cooray, Marie Voice, Michael Steele, Colin Fink, Thomas E. Whittaker, Giorgia Santilli, Paul Gissen, Benedikt B. Kaufer, Jana Reich, Judith Breuer
Nature 2023 vol. 617 pp. 564-592
Protocol for a feasibility randomized controlled trial to evaluate the efficacy, safety and tolerability of N-acetylcysteine in reducing adverse drug reactions among adults treated for multidrug-resistant tuberculosis in Tanzania Stellah G. Mpagama, Happiness C. Mvungi, Peter M. Mbelele, Hadija H. Semvua, Alphonce A. Liyoyo, Kristen Petros de Guex, Derek James Sloan, Gibson S. Kibiki, Martin Boeree, Patrick P. J. Phillips, Scott K. Heysell
Pilot and Feasibility Studies 2023 vol. 9
Urogenital pathogens in urine samples of clinically diagnosed urinary tract infected patients in Tanzania Betrand Msemwa, Martha F. Mushi, Benson Kidenya, Bernard Okamo, Katherine Lisa Keenan, Wilber Sabiiti, Donald N. Miyaye, Eveline T. Konje, Vitus Silago, Mariam M. Mirambo, Joseph R. Mwanga, Stephen Henry Gillespie, Antonio Maldonado-Barragan, Alison Fiona Sandeman, Matthew Holden, Stephen E. Mshana
IJID Regions 2023 vol. 7 pp. 170-175
A practical approach to render tuberculosis samples safe for application of tuberculosis Molecular Bacterial Load Assay in clinical settings without a biosafety level 3 laboratory Paschal Qwaray, Joseph John, Emanuel Sichone, Alice Shoo, Stephen Henry Gillespie, Nyanda Elias Ntinginya, Wilber Sabiiti
Tuberculosis 2023 vol. 138
In-person schooling is essential even during periods of high transmission of COVID-19 Alasdair Munro, Danilo Buonsenso, Sebastián González-Dambrauskas, Robert C Hughes, Sunil S Bhopal, Pablo Vásquez-Hoyos, Muge Cevik, Maria Lucia Mesa Rubio, Damian Roland
BMJ Evidence-Based Medicine 2023 vol. 28 pp. 175-179
Allele distribution and phenotypic resistance to ciprofloxacin and gentamicin among extended spectrum β-lactamases producing Escherichia coli from urine, stool, animals and environments of patients with presumptive urinary tract infection in Tanzania Adam A. Mwakyoma, Benson R. Kidenya, Caroline A. Minja, Martha F. Mushi, Alison Fiona Sandeman, Wilber Sabiiti, Matthew Holden, Catholic heal
Frontiers in Antibiotics 2023 vol. 2
Whole genome sequencing and molecular epidemiology of clinical isolates of Staphylococcus aureus from Algeria Rachida Namoune, Abla Djebbar, Martin Patrick McHugh, Mohammed El Amine Bekara, Arun Decano, Matthew Holden, Mohammed Sebaihia
Microorganisms 2023 vol. 11
Practices and motives behind antibiotics provision in drug outlets in Tanzania Pendo M. Ndaki, Joseph R. Mwanga, Martha F. Mushi, Eveline T. Konje, Kathryn Jean Fredricks, Mike Kesby, Alison Fiona Sandeman, Stella Mugassa, Msilikale W. Manyiri, Olga Loza, Katherine Lisa Keenan, Stanley M. Mwita, Matthew Holden, Stephen E. Mshana
PLoS ONE 2023 vol. 18
Associations between vision impairment and vision-related interventions on crash risk and driving cessation Helen Nguyen, Gian Luca Di Tanna, Kristy Coxon, Julie Brown, Kerrie Ren, Jacqueline Ramke, Matthew J Burton, Iris Gordon, Justine H Zhang, João Furtado, Shaffi Mdala, Lisa Keay
BMJ Open 2023 vol. 13
Tuberculosis Molecular Bacterial Load Assay reveals early delayed bacterial killing in patients with relapse Nyanda Elias Ntinginya, Abishek Bakuli, Daniel Mapamba, Wilber Sabiiti, Gibson Kibiki, Lilian Tina Minja, Davis Kuchaka, Klaus Reither, Patrick Phillips, Martin J Boeree, Stephen Henry Gillespie, Michael Hoelscher, Norbert Heinrich,
Clinical Infectious Diseases 2023 vol. 76 pp. e990-e994
Breaking out of the Bubble to Transform Education Financing Bernadette Ann-Marie O'Hare
2023
Podcast: Archives of Diseases in Childhood Podcast series: The climate crisis is also a child rights crisis Bernadette Ann-Marie O'Hare
2023
Submission for the UN Secretary General's Tax Report to implement GA Resolution 77/244 'Promotion of inclusive and effective co-operation at the United Nations' to finance development and support SDG progress. Bernadette Ann-Marie O'Hare, Stephen Hall, Eilish Anne Hannah, Rachel Etter-Phoya, Stuart William Murray, Michael Masiya
2023
Antibiotic dispensing practices during COVID-19 and implications for antimicrobial resistance (AMR) Emmanuel Olawale Olamijuwon, Eveline Konje, Catherine Kansiime, Mike Kesby, Katherine Lisa Keenan, Stella Neema, Benon Asiimwe, Stephen Mshana, Martha F Mushi, Olga Loza, Benjamin Sunday, Alison Fiona Sandeman, Derek James Sloan, Fernando Benitez-Paez, Joseph R Mwanga, Wilber Sabiiti, Matthew Holden,
Antimicrobial Resistance & Infection Control 2023 vol. 12
222-nm UVC light as a skin-safe solution to antimicrobial resistance in acute hospital settings with a particular focus on methicillin-resistant Staphylococcus aureus and surgical site infections Alexis Panzures, Robert Hammond
Journal of Applied Microbiology 2023 vol. 134
Directions of change in intrinsic case severity across successive SARS-CoV-2 variant waves have been inconsistent David J. Pascall, Elen Vink, Rachel Blacow, Naomi Bulteel, Alasdair Campbell, Robyn Campbell, Sarah Clifford, Chris Davis, Ana da Silva Filipe, Noha El Sakka, Ludmila Fjodorova, Ruth Forrest, Emily Goldstein, Rory Gunson, John Haughney, Matthew Holden, Patrick Honour, Joseph Hughes, Edward James, Tim Lewis, Oscar MacLean, Martin McHugh, Guy Mollett, Tommy Nyberg, Yusuke Onishi, Ben Parcell, Surajit Ray, David L. Robertson, Shaun R. Seaman, Sharif Shabaan, James G. Shepherd, Katherine Smollett, Kate Templeton, Elizabeth Wastnedge, Craig Wilkie, Thomas Williams, Emma C. Thomson
Journal of Infection 2023 vol. 87 pp. 128-135
The SARS-CoV-2 Alpha variant was associated with increased clinical severity of COVID-19 in Scotland David J. Pascall, Elen Vink, Rachel Blacow, Naomi Bulteel, Alasdair Campbell, Robyn Campbell, Sarah Clifford, Chris Davis, Ana da Silva Filipe, Noha El Sakka, Ludmila Fjodorova, Ruth Forrest, Emily Goldstein, Rory Gunson, John Haughney, Matthew Holden, Patrick Honour, Joseph Hughes, Edward James, Tim Lewis, Samantha Lycett, Oscar MacLean, Martin Patrick McHugh, Guy Mollett, Yusuke Onishi, Ben Parcell, Surajit Ray, David L. Robertson, Sharif Shabaan, James G. Shepherd, Katherine Smollett, Kate Templeton, Elizabeth Wastnedge, Craig Wilkie, Thomas Williams, Emma C. Thomson, The COVID-19 Genomics UK (COG-UK) Consortium
PLoS ONE 2023 vol. 18
Molecular characterizations of the coagulase-negative staphylococci species causing urinary tract infection in Tanzania Shukrani Phillip, Martha F. Mushi, Arun Decano, Jeremiah Seni, Blandina T. Mmbaga, Happiness Kumburu, Eveline T. Konje, Joseph R. Mwanga, Benson R. Kidenya, Betrand Msemwa, Stephen Henry Gillespie, Antonio Maldonado-Barragan, Alison Fiona Sandeman, Wilber Sabiiti, Matthew Holden, Stephen Mshana
Pathogens 2023 vol. 12
Diagnostic accuracy of Xpert MTB/RIF Ultra and culture assays to detect Mycobacterium Tuberculosis using OMNIgene-sputum processed stool among adult TB presumptive patients in Uganda Abdulwahab Sessolo, Emmanuel Musisi, Sylvia Kaswabuli, Josephine Zawedde, Patrick Byanyima, Wilber Sabiiti, Stanley Walimbwa, Joseph Ola, Ingvar Sanyu, Rejani Lalitha, Moses Kamya, Lucian Davis, William Worodria, Laurence Huang
PLoS One 2023 vol. 18
Forgiveness is the attribute of the strong Helen R Stagg, Jennifer A Thompson, Marc CI Lipman, Derek James Sloan, Mary Flook, Katherine L Fielding
American Journal of Respiratory and Critical Care Medicine 2023 vol. 207 pp. 193-205
Estimating the global impact of coronavirus disease 2019 on people living with HIV John Thornhill, Chloe Orkin, Muge Cevik
Current Opinion in Infectious Diseases 2023 vol. 36 pp. 20-25
Klebsiella pneumoniae carbapenamases in Escherichia coli isolated from humans and livestock in rural South-Western Uganda Barba Tuhamize, Benon Asiimwe, K Kassaza, Wilber Sabiiti, Matthew Holden, J Bazira
PLoS One 2023 vol. 18
Population genetic analysis of Plasmodium knowlesi reveals differential selection and exchange events between Borneo and Peninsular sub-populations Anna Turkiewicz, Emilia Manko, Damiola R. Oresegun, Debbie Nolder, Anton Spadar, Colin J. Sutherland, Janet Cox-Singh, Robert W. Moon, Yee-Ling Lau, Susana Campino, Taane G. Clark
Scientific Reports 2023 vol. 13
Analysis of the ARTIC V4 and V4.1 SARS-CoV-2 primers and their impact on the detection of Omicron BA.1 and BA.2 lineage-defining mutations Fatima R Ulhuq, Madhuri Barge, Kerry Falconer, Jonathan Wild, Goncalo Fernandes, Abbie Gallagher, Suzie McGinley, Ahmad Sugadol, Muhammad Tariq, Daniel Maloney, Juliet Kenicer, Rebecca Dewar, Kate Templeton, Martin Patrick McHugh
Microbial Genomics 2023 vol. 9
Automated methods for tuberculosis detection/diagnosis Oggie Arandelovic, Derek James Sloan
BioMedInformatics 2023 vol. 3
Treatment seeking behaviours, antibiotic use and relationships to multi-drug resistance Keina Sado, Katherine Lisa Keenan, Areti Manataki, Mike Kesby, Martha Mushi, Stephen Mshana, Joseph Mwanga, Stella Neema, Benon Asiimwe, Joel Bazira, John Kiiru, Dominique LaShari Green, Antonio Maldonado-Barragan, Mary Abed Al Ahad, Kathryn Jean Fredricks, Stephen Henry Gillespie, Wilber Sabiiti, Blandina T Mmbaga, Gibson Kibiki, David Aanensen, V Anne Smith, Alison Fiona Sandeman, Derek James Sloan, Matthew Holden
2023
Unravelling patient pathways in the context of antibacterial resistance in East Africa Katherine Lisa Keenan, Kathryn Jean Fredricks, Mary Abed Al Ahad, Stella Neema, Joseph R Mwanga, Mike Kesby, Martha F Mushi, Annette Aduda, Dominique LaShari Green, Andy Lynch, Sarah Insia Huque, Blandina T Mmbaga, Hannah Worthington, Catherine Kansiime, Emmanuel Olawale Olamijuwon, Nyanda E Ntinginya, Olga Loza, Joel Bazira, Antonio Maldonado-Barragan, VAnne Smith, Arun Decano, John Mwaniki Njeru, Alison Fiona Sandeman, John Stelling, Alison Elliott, David Aanensen, Stephen Henry Gillespie, Gibson Kibiki, Wilber Sabiiti, Derek James Sloan, Benon Asiimwe, John Kiiru, Stephen Mshana, Matthew Holden
BMC Infectious Diseases 2023 vol. 23
Reduction of blood C-reactive protein concentration complements the resolution of sputum bacillary load in patients on anti-tuberculosis therapy Khalide Azam, Celso Khosa, Sofia Viegas, Isabel Massango, Nilesh Batt, Ilesh Jani, Norbert Heinrich, Michael Hoelscher, Stephen Henry Gillespie, Andrea Rachow, Wilber Sabiiti
Frontiers in Immunology 2022 vol. 13
Cardiovascular risk factors among people with drug-resistant tuberculosis in Uganda Joseph Baruch Baluku, Martin Nabwana, Joanitah Nalunjogi, Winters Muttamba, Ivan Mubangizi, Lydia Nakiyingi, Willy Ssengooba, Ronald Olum, Felix Bongomin, Irene Andia-Biraro, William Worodria
BMC Cardiovascular Disorders 2022 vol. 22
Competing health risks associated with the COVID-19 pandemic and early response Stefan Baral, Amrita Rao, Jean Olivier Twahirwa Rwema, Carrie Lyons, Muge Cevik, Anna E. Kågesten, Daouda Diouf, Annette H. Sohn, Refilwe Nancy Phaswana-Mafuya, Adeeba Kamarulzaman, Gregorio Millett, Julia L. Marcus, Sharmistha Mishra, Malik Sallam
PLoS ONE 2022 vol. 17
Role and perception of clinical microbiology and infectious diseases trainees during the COVID-19 crisis Kevin Bouiller, Nathan Peiffer-Smadja, Muge Cevik, Katharina Last, Ivana A Antunović, Anja Šterbenc, Maria J Lopes, Aleksandra Barac, Valentijn Schweitzer, Sarah Dellière
Future Microbiology 2022 vol. 17 pp. 411-416
Occurrence and transmission potential of asymptomatic and presymptomatic SARS-CoV-2 infections Diana Buitrago-Garcia, Aziz Mert Ipekci, Leonie Heron, Hira Imeri, Lucia Araujo-Chaveron, Ingrid Arevalo-Rodriguez, Agustín Ciapponi, Muge Cevik, Anthony Hauser, Muhammad Irfanul Alam, Kaspar Meili, Eric A. Meyerowitz, Nirmala Prajapati, Xueting Qiu, Aaron Richterman, William Gildardo Robles-Rodriguez, Shabnam Thapa, Ivan Zhelyazkov, Georgia Salanti, Nicola Low
PLoS Medicine 2022 vol. 19
Acute hepatitis of unknown origin in children Muge Cevik, Angela L. Rasmussen, Isaac I. Bogoch, Jason Kindrachuk
The BMJ 2022 vol. 377
Medical microbiology and infection at a glance Stephen Henry Gillespie, Kathleen Bamford
2022
HPV status and HPV16 viral load in anal cancer and its association with clinical outcome Raluca Grigorescu, Anna Kirk, Andrew Stevenson, Matthew Holden, Jiafeng Pan, Kim Kavanagh, Sheila V. Graham, Kate Cuschieri
Cancer Medicine 2022 vol. 11 pp. 4193-4203
Mapping HPV 16 sub-lineages in anal cancer and implications for disease outcomes Sara Arroyo-Mühr, Raluca Grigorescu, Matthew Holden, Kate Cuschieri
Diagnostics 2022 vol. 12
A model to explain the impact of government revenue on the quality of governance and the SDGs Stephen Hall, Bernadette Ann-Marie O'Hare
2022
A simple label-free method reveals bacterial growth dynamics and antibiotic action in real-time Robert Hammond, Kerry Falconer, Thomas Powell, Ruth Bowness, Stephen Henry Gillespie
Scientific Reports 2022 vol. 12
Implications of drug-induced phenotypical resistance Robert Hammond, Frank Kloprogge, Della Pasqua, Stephen Henry Gillespie
Frontiers in Antibiotics 2022 vol. 1
Achieving basic rights in health-care facilities in low-income countries Eilish Anne Hannah, Bernadette Ann-Marie O'Hare, Marisol Lopez, Prof Stephen Hall
The Lancet Global Health 2022 vol. 10
A population framework for predicting the proportion of people infected by the far-field airborne transmission of SARS-CoV-2 indoors Christopher Iddon, Benjamin Jones, Patrick Sharpe, Muge Cevik, Shaun Fitzgerald
Building and Environment 2022 vol. 221
Accuracy of GenoQuick MTB test in detection of Mycobacterium tuberculosis in sputum from TB presumptive patients in Uganda Sylvia Kaswabuli, Emmanuel Musisi, Patrick Byanyima, Abdul Sessolo, Ingvar Sanyu, Josephine Zawedde, William Worodria, Laurence Huang, Alfred Okeng, Freddie Bwanga
SAGE Open Medicine 2022 vol. 10
Genomic surveillance of Salmonella spp. in the Philippines during 2013-2014 Marietta L Lagrada, Silvia Argimón, Janice B Borlasa, Jaywardeen P Abad, June M Gayeta, Melissa L Masim, Agnettah M Olorosa, Victoria Cohen, Benjamin Jeffrey, Khalil Abudahab, Sonia B Sia, Charmian M Hufano, John Stelling, Matthew Holden, David M Aanensen, Celia C Carlos
Transactions of the Royal Society of Tropical Medicine and Hygiene 2022 vol. 116 pp. 1202-1213
Emergence of methicillin resistance predates the clinical use of antibiotics Jesper Larsen, Claire L Raisen, Xiaoliang Ba, Nicholas J Sadgrove, Guillermo F Padilla-González, Monique S J Simmonds, Igor Loncaric, Heidrun Kerschner, Petra Apfalter, Rainer Hartl, Ariane Deplano, Stien Vandendriessche, Barbora Černá Bolfíková, Pavel Hulva, Maiken C Arendrup, Rasmus K Hare, Céline Barnadas, Marc Stegger, Raphael N Sieber, Robert L Skov, Andreas Petersen, Øystein Angen, Sophie L Rasmussen, Carmen Espinosa-Gongora, Frank M Aarestrup, Laura J Lindholm, Suvi M Nykäsenoja, Frederic Laurent, Karsten Becker, Birgit Walther, Corinna Kehrenberg, Christiane Cuny, Franziska Layer, Guido Werner, Wolfgang Witte, Ivonne Stamm, Paolo Moroni, Hannah J Jørgensen, Hermínia de Lencastre, Emilia Cercenado, Fernando García-Garrote, Stefan Börjesson, Sara Hæggman, Vincent Perreten, Christopher J Teale, Andrew S Waller, Bruno Pichon, Martin D Curran, Matthew J Ellington, John J Welch, Sharon J Peacock, David J Seilly, Fiona J E Morgan, Julian Parkhill, Nazreen F Hadjirin, Jodi A Lindsay, Matthew Holden, Giles F Edwards, Geoffrey Foster, Gavin K Paterson, Xavier Didelot, Mark A Holmes, Ewan M Harrison, Anders R Larsen
Nature 2022 vol. 602 pp. 135-141
Association between women's authorship and women's editorship in infectious diseases journals Katharina Last, Lilith Hübsch, Muge Cevik, Martin Wolkewitz, Sophie Elisabeth Müller, Angela Huttner, Cihan Papan
Lancet Infectious Diseases 2022 vol. 22 pp. 1455-1464
An analysis of tax abuse, debt, and climate change risk in low- and lower-middle-income countries Marisol Lopez, Bernadette Ann-Marie O'Hare, Eilish Anne Hannah, Stephen Hall
BMJ Paediatrics Open 2022 vol. 6
Carbapenem-only combination therapy against multi-drug resistant Pseudomonas aeruginosa Sally Lorna Shirran, Peter John Coote
Antibiotics 2022 vol. 11
Use of a molecular bacterial load assay to distinguish between active TB and post-TB lung disease Peter M. Mbelele, Wilber Sabiiti, Scott K. Heysell, Elingarami Sauli, Emmanuel A. Mpolya, Sayoki Mfinanga, Stephen Henry Gillespie, Kennedy K. Addo, Gibson Kibiki, Derek James Sloan, Stellah G. Mpagama
International Journal of Tuberculosis and Lung Disease 2022 vol. 26 pp. 276-278
High intrapulmonary rifampicin and isoniazid concentrations are associated with rapid sputum bacillary clearance in patients with pulmonary tuberculosis Andrew D McCallum, Henry E Pertinez, Aaron P Chirambo, Irene Sheha, Madalitso Chasweka, Rose Malamba, Doris Shani, Alex Chitani, Jane E Mallewa, Jamilah Z Meghji, Jehan F Ghany, Elizabeth L Corbett, Stephen B Gordon, Geraint R Davies, Saye H Khoo, Derek James Sloan, Henry C Mwandumba
Clinical Infectious Diseases 2022 vol. 75
Presence of optrA-mediated linezolid resistance in multiple lineages and plasmids of Enterococcus faecalis revealed by long read sequencing Martin Patrick McHugh, Kerry Andrea Pettigrew, Geoff Toner, Elham Khatamzas, Noha el Sakka, Anne Marie Karcher, Joanna Walker, Robert Weir, Danièle Meunier, Katie L. Hopkins, Neil Woodford, Kate E. Templeton, Stephen Henry Gillespie, Matthew Holden
Microbiology 2022 vol. 168
Management of the sick child Elizabeth Molyneux, Bernadette Ann-Marie O'Hare
2022 vol. 1
Systematic assessment of clinical and bacteriological markers for tuberculosis reveals discordance and inaccuracy of symptom-based diagnosis for treatment response monitoring Issa Sabi, Joseph John, Emanuel Sichone, Wilyhelmina Olomi, Stephen Henry Gillespie, Nyanda E. Ntinginya, Wilber Sabiiti
Frontiers in Medicine 2022 vol. 9
Detection and quantification of viable Mycobacterium tuberculosis bacilli in saline-processed stool samples by Tuberculosis Molecular Bacterial Load Assay Emmanuel Musisi, Abdul Ssesolo, Derek James Sloan, Stephen Henry Gillespie, Wilber Sabiiti
Microbiology Spectrum 2022 vol. 10
High Mycobacterium tuberculosis bacillary loads detected by tuberculosis molecular bacterial load assay in patient stool Emmanuel Musisi, Abdul Sessolo, Sylvia Kaswabuli, Josephine Zawedde, Patrick Byanyima, Shariifah Kasiinga, Ingvar Sanyu, Esther Uwimaana, Stanley Walimbwa, Joseph Ola, Willy Ssengooba, Christine Sekaggya, Moses L. Joloba, William Worodria, Laurence Huang, Stephen Henry Gillespie, Derek James Sloan, Wilber Sabiiti
Microbiology Spectrum 2022 vol. 10
A systematic review of strategies adopted to scale up COVID-19 testing in low, middle and high-income countries Winters Muttamba, Bernadette Ann-Marie O'Hare, Vibhor Saxena, Bbuye Mudarshiru, Parul Tyagi, Andrew Ramsay, Bruce Kirenga, Wilber Sabiiti
BMJ Open 2022 vol. 12
Non-prescribed antibiotic dispensing practices for symptoms of urinary tract infection in community pharmacies and accredited drug dispensing outlets in Tanzania Pendo M. Ndaki, Martha F. Mushi, Joseph R. Mwanga, Eveline T. Konje, Stella Mugassa, Msilikale W. Manyiri, Stanley M. Mwita, Nyanda E. Ntinginya, Blandina T. Mmbaga, Katherine Lisa Keenan, Wilber Sabiiti, Mike Kesby, Manuel Fernando Benitez Paez, Alison Fiona Sandeman, Matthew Holden, Stephen E. Mshana
BMC Primary Care 2022 vol. 23
Genomic epidemiology of SARS-CoV-2 in a university outbreak setting and implications for public health planning Sema Nickbakhsh, Joseph Hughes, Nicolaos Christofidis, Emily Griffiths, Sharif Shaaban, Jessica Enright, Katherine Smollett, Kyriaki Nomikou, Natasha Palmalux, Lily Tong, Stephen Carmichael, Vattipally B. Sreenu, Richard Orton, Emily J. Goldstein, Rachael M. Tomb, Kate Templeton, Rory N. Gunson, Ana da Silva Filipe, Catriona Milosevic, Emma Thomson, David L. Robertson, Matthew Holden, Christopher J. R. Illingworth, Alison Smith-Palmer, Martin Patrick McHugh
Scientific Reports 2022 vol. 12
Higher-income countries and global child health Bernadette Ann-Marie O'Hare, Marisol Lopez, Eilish Anne Hannah, Takondwa Chimowa, Stephen Hall
Paediatrics and Child Health 2022 vol. 32 pp. 95-100
Joint Submission to the UN Independent Expert on Foreign Debt - Current challenges to financing for development, including education. Bernadette Ann-Marie O'Hare, Tax and Education Alliance
2022
Tackling climate change - our action plan Bernadette Ann-Marie O'Hare
2022
Tax abuse Bernadette Ann-Marie O'Hare, Marisol Lopez, Bernadetta Mazimbe, Stuart William Murray, Nicholas Spencer, C Torres, Stephen Hall
PLOS Global Public Health 2022 vol. 2
The impact of government revenue on the achievement of the Sustainable Development Goals and the amplification potential of good governance Bernadette Ann-Marie O'Hare, Stephen Hall
Central European Journal of Economic Modelling and Econometrics 2022 vol. 14 pp. 109-129
De novo assembly of Plasmodium knowlesi genomes from clinical samples explain the counterintuitive intrachromosomal organization of variant SICAvar and kir multiple gene family members Peter Jacob Thorpe, Ernest D. Benavente, Susanna Campino, Muh Fauzi, Robert W. Moon, Taane G. Clark, Janet Cox-Singh
Frontiers in Genetics 2022 vol. 13
Genomics-informed outbreak investigations of SARS-CoV-2 using civet Áine O’Toole, Verity Hill, Ben Jackson, Rebecca Dewar, Nikita Sahadeo, Rachel Colquhoun, Stefan Rooke, J. T. McCrone, Kate Duggan, Martin Patrick McHugh, Samuel M. Nicholls, Radoslaw Poplawski, The COVID-19 Genomics UK (COG-UK) Consortium, COVID-19 Impact Project (Trinidad & Tobago Group), David Aanensen, Matt Holden, Tom Connor, Nick Loman, Ian Goodfellow, Christine V. F. Carrington, Kate Templeton, Andrew Rambaut
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Automated Remote Pulse Oximetry System (ARPOS) David Morrison, Gayle Helane Doherty, Devesh J Dhasmana, David Cameron Christopher Harris-Birtill
Sensors 2022 vol. 21
Automated Remote Pulse Oximetry System (ARPOS) Methodology and Protocol David Morrison, Gayle Helane Doherty, Devesh J Dhasmana, David Cameron Christopher Harris-Birtill
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Indirect protection by reducing transmission Aaron Richterman, Eric A Meyerowitz, Muge Cevik
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Modelling the within-host spread of SARS-CoV-2 infection, and the subsequent immune response, using a hybrid, multiscale, individual-based model. Part I: Macrophages Christopher F Rowlatt, Mark Andrew Joseph Chaplain, David John Hughes, Stephen Henry Gillespie, David Dockrell, Ingolfur johannessen , Ruth Bowness
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An evaluation of global Chikungunya clinical management guidelines Eika Webb, Melina Michelen, Ishmeala Rigby, Andrew Dagens, Dania Dahmash, Vincent Cheng, Reena Joseph, Samuel Lipworth, Eli Harriss, Erhui Cai, Robert Nartowski, Pande Putu Januraga, Keerti Gedela, Evi Sukmaningrum, Muge Cevik, Helen Groves, Peter Hart, Tom Fletcher, Lucille Blumberg, Peter W Horby, Shevin T Jacob, Louise Sigfrid
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Availability, scope and quality of monkeypox clinical management guidelines globally Eika Webb, Ishmeala Rigby, Melina Michelen, Andrew Dagens, Vincent Cheng, Amanda M Rojek, Dania Dahmash, Susan Khader, Keerti Gedela, Alice Norton, Muge Cevik, Erhui Cai, Eli Harriss, Samuel Lipworth, Robert Nartowski, Helen Groves, Peter Hart, Lucille Blumberg, Tom Fletcher, Shevin T Jacob, Louise Sigfrid, Peter W Horby
BMJ Global Health 2022 vol. 7
SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway Brian J. Willett, Joe Grove, Oscar A. MacLean, Craig Wilkie, Giuditta De Lorenzo, Wilhelm Furnon, Diego Cantoni, Sam Scott, Nicola Logan, Shirin Ashraf, Maria Manali, Agnieszka Szemiel, Vanessa Cowton, Elen Vink, William T. Harvey, Chris Davis, Patawee Asamaphan, Katherine Smollett, Lily Tong, Richard Orton, Joseph Hughes, Poppy Holland, Vanessa Silva, David J. Pascall, Kathryn Puxty, Ana da Silva Filipe, Gonzalo Yebra, Sharif Shaaban, Matthew Holden, Rute Maria Pinto, Rory Gunson, Kate Templeton, Pablo R. Murcia, Arvind H. Patel, Paul Klenerman, Susanna Dunachie, John Haughney, David L. Robertson, Massimo Palmarini, Surajit Ray, Emma C. Thomson
Nature Microbiology 2022 vol. First Online
The genus Serratia revisited by genomics David J. Williams, Patrick A. D. Grimont, Adrián Cazares, Francine Grimont, Elisabeth Ageron, Kerry Andrea Pettigrew, Daniel Cazares, Elisabeth Njamkepo, François-Xavier Weill, Eva Heinz, Matthew Holden, Nicholas R. Thomson, Sarah J. Coulthurst
Nature Communications 2022 vol. 13
Extracting and classifying salient fields of view from microscopy slides of tuberculosis bacteria Oggie Arandelovic, Evelin Dombay, Wilber Sabiiti, Derek James Sloan
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Tuberculosis bacteria detection and counting in fluorescence microscopy images using a multi-stage deep learning pipeline Oggie Arandelovic, Wilber Sabiiti, Derek James Sloan
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Aspirin in patients admitted to hospital with COVID-19 (RECOVERY) Devesh J Dhasmana, Peter W Hornby, Martin J Landray
Lancet 2022 vol. 399 pp. 143-151
Casirivimab and imdevimab in patients admitted to hospital with COVID-19 (RECOVERY) Devesh J Dhasmana, Peter W Horby, Martin J Landray
The Lancet 2022 vol. 399 pp. 665-676
Effect of noninvasive respiratory strategies on intubation or mortality among patients with acute hypoxemic respiratory failure and COVID-19 Gavin D Perkins, Chen Ji, Bronwen A Connolly, Keith Couper, Ranjit Lall, J Kenneth Baillie, Judy M Bradley, Paul Dark, Chirag Dave, Anthony De Soyza, Anna V Dennis, Anne Devrell, Sara Fairbairn, Hakim Ghani, Ellen A Gorman, Christopher A Green, Nicholas Hart, Siew Wan Hee, Zoe Kimbley, Shyam Madathil, Nicola McGowan, Benjamin Messer, Jay Naisbitt, Chloe Norman, Dhruv Parekh, Emma M Parkin, Jaimin Patel, Scott E Regan, Clare Ross, Anthony J Rostron, Mohammad Saim, Anita K Simonds, Emma Skilton, Nigel Stallard, Michael Steiner, Rama Vancheeswaran, Joyce Yeung, Daniel F McAuley, Devesh J Dhasmana
JAMA - Journal of the American Medical Association 2022 vol. 327 pp. 546-558
Essential features of an interstitial lung disease multidisciplinary meeting Alan K Y Teoh, Anne E Holland, Julie Morisset, Kevin R Flaherty, Athol U Wells, Simon L F Walsh, Ian Glaspole, Wim A Wuyts, Tamera J Corte, Devesh J Dhasmana
Annals of the American Thoracic Society 2022 vol. 19 pp. 66-73
Protection against SARS-CoV-2 after Covid-19 vaccination and previous infection Victoria Hall, Sarah Foulkes, Ferdinando Insalata, Peter Kirwan, Ayoub Saei, Ana Atti, Edgar Wellington, Jameel Khawam, Katie Munro, Michelle Cole, Caio Tranquillini, Andrew Taylor-Kerr, Nipunadi Hettiarachchi, Davina Calbraith, Noshin Sajedi, Iain Milligan, Yrene Themistocleous, Diane Corrigan, Lisa Cromey, Lesley Price, Sally Stewart, Elen de Lacy, Chris Norman, Ezra Linley, Ashley D Otter, Amanda Semper, Jacqueline Hewson, Silvia D'Arcangelo, Meera Chand, Colin S Brown, Tim Brooks, Jasmin Islam, Andre Charlett, Susan Hopkins, Devesh J Dhasmana
New England Journal of Medicine 2022 vol. 386 pp. 1207-1220
Cataract surgery redesign Kim Lawrence Ah-See, Andrew Blaikie, Natalie Boyle, Jonathan Foulds, Catherine Wheeldon, Peter Wilson, Caroline Styles, Shona Sutherland, Roshini Sanders
Clinical Ophthalmology 2021 vol. 15 pp. 289—297
Eyecare education in times of COVID-19 Martin Anderson, Karsten Paust, Andrew Blaikie
Eye News 2021 vol. 27
Will Africans take COVID-19 vaccination? AbdulAzeez A Anjorin, Ismail A Odetokun, Ajibola I Abioye, Hager Elnadi, Mfon Valencia Umoren, Bamu F Damaris, Joseph Eyedo, Haruna I Umar, Jean B Nyandwi, Mena M Abdalla, Sodiq O Tijani, Kwame S Awiagah, Gbolahan A Idowu, Sifeuh N Achille Fabrice, Aala M O Maisara, Youssef Razouqi, Zuhal E Mhgoob, Salim Parker, Osaretin E Asowata, Ismail O Adesanya, Maureen A Obara, Shameem Jaumdally, Taofik A Okuneye, Kennedy M Mbanzulu, Hajj Daitoni, Ezekiel F Hallie, Rasha Mosbah, Folorunso O Fasina
PLoS ONE 2021 vol. 16

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