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Infection and Global Health Research Division

Research at the University of St Andrews School of Medicine

 

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Infection and Global Health Medicine Research Division recent research publications

100 (of 521 /dk/atira/pure/researchoutput/status/published available) for Infection and Global Health Division (source: University of St Andrews PURE)
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Improving outcomes for multidrug-resistant TB Stephen Henry Gillespie
International Journal of Tuberculosis and Lung Disease 2023 vol. 27 pp. 1-2
The role of multidimensional poverty in antibiotic misuse Dominique LaShari Green, Katherine Lisa Keenan, Sarah Insia Huque, Martha F Mushi, Catherine Kansiime, Benon Asiimwe, John Kiiru, Stephen Mshana, Stella Neema, Joseph R Mwanga, Mike Kesby, Andy Lynch, Hannah Worthington, Emmanuel Olawale Olamijuwon, Mary Abed Al Ahad, Annette Aduda, John Mwaniki Njeru, Blandina T Mmbaga, Joel Bazira, Alison Fiona Sandeman, John Stelling, Stephen Henry Gillespie, Gibson Kibiki, Wilber Sabiiti, Derek James Sloan, Matthew Holden, V Anne Smith, Arun Decano, Antonio Maldonado-Barragan, David Aanensen, Nyanda E Ntinginya, Alison Elliott,
The Lancet Global Health 2023 vol. 11 pp. e59-e68
How can corporate taxes contribute to sub-Saharan Africa's Sustainable Development Goals (SDGs)? Eilish Anne Hannah, Bernadette Ann-Marie O'Hare, Marisol Lopez, Stuart William Murray, Rachel Etter-Phoya, Stephen Hall, Michael Masiya
Globalization and Health 2023 vol. 19 pp. 17
Implementation of evidence-based multiple focus integrated intensified TB screening to end TB (EXIT-TB) package in East Africa Kahabi Isangula, Doreen Philbert, Florence Ngari, Tigest Ajeme, Godfather Kimaro, Getnet Yimer, Nicholaus P. Mnyambwa, Winters Muttamba, Irene Najjingo, Aman Wilfred, Johnson Mshiu, Bruce Kirenga, Steve Wandiga, Blandina Theophil Mmbaga, Francis Donard, Douglas Okelloh, Benson Mtesha, Hussen Mohammed, Hadija Semvua, James Ngocho, Sayoki Mfinanga, Esther Ngadaya
BMC Infectious Diseases 2023 vol. 23
A hybrid individual-based mathematical model to study bladder infections Anas Lasri Doukkali, Tommaso Lorenzi, Jennifer L. Rohn, Ruth Bowness
Frontiers in Applied Mathematics and Statistics 2023 vol. 9
Building sustainable clinical trial sites in Sub-Saharan Africa through networking, infrastructure improvement, training and conducting clinical studies Anna-Maria Mekota, Stephen Henry Gillespie, Michael Hoelscher, Andreas H. Diacon, Rodney Dawson, Gavin Churchyard, Ian Sanne, Lilian Minja, Gibson Kibiki, Leonard Maboko, Shabir Lakhi, Moses Joloba, Abraham Alabi, Bruce Kirenga, Timothy D. McHugh, Martin P. Grobusch, Martin J. Boeree
Acta Tropica 2023 vol. 238
A practical approach to render tuberculosis samples safe for application of tuberculosis Molecular Bacterial Load Assay in clinical settings without a biosafety level 3 laboratory Paschal Qwaray, Joseph John, Emanuel Sichone, Alice Shoo, Stephen Henry Gillespie, Nyanda Elias Ntinginya, Wilber Sabiiti
Tuberculosis 2023 vol. 138
Tuberculosis Molecular Bacterial Load Assay reveals early delayed bacterial killing in patients with relapse Nyanda Elias Ntinginya, Abishek Bakuli, Daniel Mapamba, Wilber Sabiiti, Gibson Kibiki, Lilian Tina Minja, Davis Kuchaka, Klaus Reither, Patrick Phillips, Martin J Boeree, Stephen Henry Gillespie, Michael Hoelscher, Norbert Heinrich,
Clinical Infectious Diseases 2023 vol. 76 pp. e990-e994
Podcast: Archives of Diseases in Childhood Podcast series: The climate crisis is also a child rights crisis Bernadette Ann-Marie O'Hare
2023
Antibiotic dispensing practices during COVID-19 and implications for antimicrobial resistance (AMR) Emmanuel Olawale Olamijuwon, Eveline Konje, Catherine Kansiime, Mike Kesby, Katherine Lisa Keenan, Stella Neema, Benon Asiimwe, Stephen Mshana, Martha F Mushi, Olga Loza, Benjamin Sunday, Alison Fiona Sandeman, Derek James Sloan, Fernando Benitez-Paez, Joseph R Mwanga, Wilber Sabiiti, Matthew Holden,
Antimicrobial Resistance & Infection Control 2023 vol. 12
Molecular characterizations of the coagulase-negative staphylococci species causing urinary tract infection in Tanzania Shukrani Phillip, Martha F. Mushi, Arun Decano, Jeremiah Seni, Blandina T. Mmbaga, Happiness Kumburu, Eveline T. Konje, Joseph R. Mwanga, Benson R. Kidenya, Betrand Msemwa, Stephen Henry Gillespie, Antonio Maldonado-Barragan, Alison Fiona Sandeman, Wilber Sabiiti, Matthew Holden, Stephen Mshana
Pathogens 2023 vol. 12
Forgiveness is the attribute of the strong Helen R Stagg, Jennifer A Thompson, Marc CI Lipman, Derek James Sloan, Mary Flook, Katherine L Fielding
American Journal of Respiratory and Critical Care Medicine 2023 vol. 207 pp. 193-205
Estimating the global impact of coronavirus disease 2019 on people living with HIV John Thornhill, Chloe Orkin, Muge Cevik
Current Opinion in Infectious Diseases 2023 vol. 36 pp. 20-25
Population genetic analysis of Plasmodium knowlesi reveals differential selection and exchange events between Borneo and Peninsular sub-populations Anna Turkiewicz, Emilia Manko, Damiola R. Oresegun, Debbie Nolder, Anton Spadar, Colin J. Sutherland, Janet Cox-Singh, Robert W. Moon, Yee-Ling Lau, Susana Campino, Taane G. Clark
Scientific Reports 2023 vol. 13
Reduction of blood C-reactive protein concentration complements the resolution of sputum bacillary load in patients on anti-tuberculosis therapy Khalide Azam, Celso Khosa, Sofia Viegas, Isabel Massango, Nilesh Batt, Ilesh Jani, Norbert Heinrich, Michael Hoelscher, Stephen Henry Gillespie, Andrea Rachow, Wilber Sabiiti
Frontiers in Immunology 2022 vol. 13
Cardiovascular risk factors among people with drug-resistant tuberculosis in Uganda Joseph Baruch Baluku, Martin Nabwana, Joanitah Nalunjogi, Winters Muttamba, Ivan Mubangizi, Lydia Nakiyingi, Willy Ssengooba, Ronald Olum, Felix Bongomin, Irene Andia-Biraro, William Worodria
BMC Cardiovascular Disorders 2022 vol. 22
Competing health risks associated with the COVID-19 pandemic and early response Stefan Baral, Amrita Rao, Jean Olivier Twahirwa Rwema, Carrie Lyons, Muge Cevik, Anna E. Kågesten, Daouda Diouf, Annette H. Sohn, Refilwe Nancy Phaswana-Mafuya, Adeeba Kamarulzaman, Gregorio Millett, Julia L. Marcus, Sharmistha Mishra, Malik Sallam
PLoS ONE 2022 vol. 17
Role and perception of clinical microbiology and infectious diseases trainees during the COVID-19 crisis Kevin Bouiller, Nathan Peiffer-Smadja, Muge Cevik, Katharina Last, Ivana A Antunović, Anja Šterbenc, Maria J Lopes, Aleksandra Barac, Valentijn Schweitzer, Sarah Dellière
Future Microbiology 2022 vol. 17 pp. 411-416
Occurrence and transmission potential of asymptomatic and presymptomatic SARS-CoV-2 infections Diana Buitrago-Garcia, Aziz Mert Ipekci, Leonie Heron, Hira Imeri, Lucia Araujo-Chaveron, Ingrid Arevalo-Rodriguez, Agustín Ciapponi, Muge Cevik, Anthony Hauser, Muhammad Irfanul Alam, Kaspar Meili, Eric A. Meyerowitz, Nirmala Prajapati, Xueting Qiu, Aaron Richterman, William Gildardo Robles-Rodriguez, Shabnam Thapa, Ivan Zhelyazkov, Georgia Salanti, Nicola Low
PLoS Medicine 2022 vol. 19
Acute hepatitis of unknown origin in children Muge Cevik, Angela L. Rasmussen, Isaac I. Bogoch, Jason Kindrachuk
The BMJ 2022 vol. 377
Medical microbiology and infection at a glance Stephen Henry Gillespie, Kathleen Bamford
2022
HPV status and HPV16 viral load in anal cancer and its association with clinical outcome Raluca Grigorescu, Anna Kirk, Andrew Stevenson, Matthew Holden, Jiafeng Pan, Kim Kavanagh, Sheila V. Graham, Kate Cuschieri
Cancer Medicine 2022 vol. 11 pp. 4193-4203
Mapping HPV 16 sub-lineages in anal cancer and implications for disease outcomes Sara Arroyo-Mühr, Raluca Grigorescu, Matthew Holden, Kate Cuschieri
Diagnostics 2022 vol. 12
A model to explain the impact of government revenue on the quality of governance and the SDGs Stephen Hall, Bernadette Ann-Marie O'Hare
2022
A simple label-free method reveals bacterial growth dynamics and antibiotic action in real-time Robert Hammond, Kerry Falconer, Thomas Powell, Ruth Bowness, Stephen Henry Gillespie
Scientific Reports 2022 vol. 12
Implications of drug-induced phenotypical resistance Robert Hammond, Frank Kloprogge, Della Pasqua, Stephen Henry Gillespie
Frontiers in Antibiotics 2022 vol. 1
Achieving basic rights in health-care facilities in low-income countries Eilish Anne Hannah, Bernadette Ann-Marie O'Hare, Marisol Lopez, Prof Stephen Hall
The Lancet Global Health 2022 vol. 10
A population framework for predicting the proportion of people infected by the far-field airborne transmission of SARS-CoV-2 indoors Christopher Iddon, Benjamin Jones, Patrick Sharpe, Muge Cevik, Shaun Fitzgerald
Building and Environment 2022 vol. 221
Accuracy of GenoQuick MTB test in detection of Mycobacterium tuberculosis in sputum from TB presumptive patients in Uganda Sylvia Kaswabuli, Emmanuel Musisi, Patrick Byanyima, Abdul Sessolo, Ingvar Sanyu, Josephine Zawedde, William Worodria, Laurence Huang, Alfred Okeng, Freddie Bwanga
SAGE Open Medicine 2022 vol. 10
Genomic surveillance of Salmonella spp. in the Philippines during 2013-2014 Marietta L Lagrada, Silvia Argimón, Janice B Borlasa, Jaywardeen P Abad, June M Gayeta, Melissa L Masim, Agnettah M Olorosa, Victoria Cohen, Benjamin Jeffrey, Khalil Abudahab, Sonia B Sia, Charmian M Hufano, John Stelling, Matthew Holden, David M Aanensen, Celia C Carlos
Transactions of the Royal Society of Tropical Medicine and Hygiene 2022 vol. 116 pp. 1202-1213
Emergence of methicillin resistance predates the clinical use of antibiotics Jesper Larsen, Claire L Raisen, Xiaoliang Ba, Nicholas J Sadgrove, Guillermo F Padilla-González, Monique S J Simmonds, Igor Loncaric, Heidrun Kerschner, Petra Apfalter, Rainer Hartl, Ariane Deplano, Stien Vandendriessche, Barbora Černá Bolfíková, Pavel Hulva, Maiken C Arendrup, Rasmus K Hare, Céline Barnadas, Marc Stegger, Raphael N Sieber, Robert L Skov, Andreas Petersen, Øystein Angen, Sophie L Rasmussen, Carmen Espinosa-Gongora, Frank M Aarestrup, Laura J Lindholm, Suvi M Nykäsenoja, Frederic Laurent, Karsten Becker, Birgit Walther, Corinna Kehrenberg, Christiane Cuny, Franziska Layer, Guido Werner, Wolfgang Witte, Ivonne Stamm, Paolo Moroni, Hannah J Jørgensen, Hermínia de Lencastre, Emilia Cercenado, Fernando García-Garrote, Stefan Börjesson, Sara Hæggman, Vincent Perreten, Christopher J Teale, Andrew S Waller, Bruno Pichon, Martin D Curran, Matthew J Ellington, John J Welch, Sharon J Peacock, David J Seilly, Fiona J E Morgan, Julian Parkhill, Nazreen F Hadjirin, Jodi A Lindsay, Matthew Holden, Giles F Edwards, Geoffrey Foster, Gavin K Paterson, Xavier Didelot, Mark A Holmes, Ewan M Harrison, Anders R Larsen
Nature 2022 vol. 602 pp. 135-141
Association between women's authorship and women's editorship in infectious diseases journals Katharina Last, Lilith Hübsch, Muge Cevik, Martin Wolkewitz, Sophie Elisabeth Müller, Angela Huttner, Cihan Papan
Lancet Infectious Diseases 2022 vol. 22 pp. 1455-1464
An analysis of tax abuse, debt, and climate change risk in low- and lower-middle-income countries Marisol Lopez, Bernadette Ann-Marie O'Hare, Eilish Anne Hannah, Stephen Hall
BMJ Paediatrics Open 2022 vol. 6
Carbapenem-only combination therapy against multi-drug resistant Pseudomonas aeruginosa Sally Lorna Shirran, Peter John Coote
Antibiotics 2022 vol. 11
Use of a molecular bacterial load assay to distinguish between active TB and post-TB lung disease Peter M. Mbelele, Wilber Sabiiti, Scott K. Heysell, Elingarami Sauli, Emmanuel A. Mpolya, Sayoki Mfinanga, Stephen Henry Gillespie, Kennedy K. Addo, Gibson Kibiki, Derek James Sloan, Stellah G. Mpagama
International Journal of Tuberculosis and Lung Disease 2022 vol. 26 pp. 276-278
High intrapulmonary rifampicin and isoniazid concentrations are associated with rapid sputum bacillary clearance in patients with pulmonary tuberculosis Andrew D McCallum, Henry E Pertinez, Aaron P Chirambo, Irene Sheha, Madalitso Chasweka, Rose Malamba, Doris Shani, Alex Chitani, Jane E Mallewa, Jamilah Z Meghji, Jehan F Ghany, Elizabeth L Corbett, Stephen B Gordon, Geraint R Davies, Saye H Khoo, Derek James Sloan, Henry C Mwandumba
Clinical Infectious Diseases 2022 vol. 75
Presence of optrA-mediated linezolid resistance in multiple lineages and plasmids of Enterococcus faecalis revealed by long read sequencing Martin Patrick McHugh, Kerry Andrea Pettigrew, Geoff Toner, Elham Khatamzas, Noha el Sakka, Anne Marie Karcher, Joanna Walker, Robert Weir, Danièle Meunier, Katie L. Hopkins, Neil Woodford, Kate E. Templeton, Stephen Henry Gillespie, Matthew Holden
Microbiology 2022 vol. 168
Management of the sick child Elizabeth Molyneux, Bernadette Ann-Marie O'Hare
2022 vol. 1
Systematic assessment of clinical and bacteriological markers for tuberculosis reveals discordance and inaccuracy of symptom-based diagnosis for treatment response monitoring Issa Sabi, Joseph John, Emanuel Sichone, Wilyhelmina Olomi, Stephen Henry Gillespie, Nyanda E. Ntinginya, Wilber Sabiiti
Frontiers in Medicine 2022 vol. 9
Detection and quantification of viable Mycobacterium tuberculosis bacilli in saline-processed stool samples by Tuberculosis Molecular Bacterial Load Assay Emmanuel Musisi, Abdul Ssesolo, Derek James Sloan, Stephen Henry Gillespie, Wilber Sabiiti
Microbiology Spectrum 2022 vol. 10
High Mycobacterium tuberculosis bacillary loads detected by tuberculosis molecular bacterial load assay in patient stool Emmanuel Musisi, Abdul Sessolo, Sylvia Kaswabuli, Josephine Zawedde, Patrick Byanyima, Shariifah Kasiinga, Ingvar Sanyu, Esther Uwimaana, Stanley Walimbwa, Joseph Ola, Willy Ssengooba, Christine Sekaggya, Moses L. Joloba, William Worodria, Laurence Huang, Stephen Henry Gillespie, Derek James Sloan, Wilber Sabiiti
Microbiology Spectrum 2022 vol. 10
A systematic review of strategies adopted to scale up COVID-19 testing in low, middle and high-income countries Winters Muttamba, Bernadette Ann-Marie O'Hare, Vibhor Saxena, Bbuye Mudarshiru, Parul Tyagi, Andrew Ramsay, Bruce Kirenga, Wilber Sabiiti
BMJ Open 2022 vol. 12
Non-prescribed antibiotic dispensing practices for symptoms of urinary tract infection in community pharmacies and accredited drug dispensing outlets in Tanzania Pendo M. Ndaki, Martha F. Mushi, Joseph R. Mwanga, Eveline T. Konje, Stella Mugassa, Msilikale W. Manyiri, Stanley M. Mwita, Nyanda E. Ntinginya, Blandina T. Mmbaga, Katherine Lisa Keenan, Wilber Sabiiti, Mike Kesby, Manuel Fernando Benitez Paez, Alison Fiona Sandeman, Matthew Holden, Stephen E. Mshana
BMC Primary Care 2022 vol. 23
Genomic epidemiology of SARS-CoV-2 in a university outbreak setting and implications for public health planning Sema Nickbakhsh, Joseph Hughes, Nicolaos Christofidis, Emily Griffiths, Sharif Shaaban, Jessica Enright, Katherine Smollett, Kyriaki Nomikou, Natasha Palmalux, Lily Tong, Stephen Carmichael, Vattipally B. Sreenu, Richard Orton, Emily J. Goldstein, Rachael M. Tomb, Kate Templeton, Rory N. Gunson, Ana da Silva Filipe, Catriona Milosevic, Emma Thomson, David L. Robertson, Matthew Holden, Christopher J. R. Illingworth, Alison Smith-Palmer, Martin Patrick McHugh
Scientific Reports 2022 vol. 12
Higher-income countries and global child health Bernadette Ann-Marie O'Hare, Marisol Lopez, Eilish Anne Hannah, Takondwa Chimowa, Stephen Hall
Paediatrics and Child Health 2022 vol. 32 pp. 95-100
Joint Submission to the UN Independent Expert on Foreign Debt - Current challenges to financing for development, including education. Bernadette Ann-Marie O'Hare, Tax and Education Alliance
2022
Tackling climate change - our action plan Bernadette Ann-Marie O'Hare
2022
Tax abuse Bernadette Ann-Marie O'Hare, Marisol Lopez, Bernadetta Mazimbe, Stuart William Murray, Nicholas Spencer, C Torres, Stephen Hall
PLOS Global Public Health 2022 vol. 2
The impact of government revenue on the achievement of the Sustainable Development Goals and the amplification potential of good governance Bernadette Ann-Marie O'Hare, Stephen Hall
Central European Journal of Economic Modelling and Econometrics 2022 vol. 14 pp. 109-129
De novo assembly of Plasmodium knowlesi genomes from clinical samples explain the counterintuitive intrachromosomal organization of variant SICAvar and kir multiple gene family members Peter Jacob Thorpe, Ernest D. Benavente, Susanna Campino, Muh Fauzi, Robert W. Moon, Taane G. Clark, Janet Cox-Singh
Frontiers in Genetics 2022 vol. 13
Genomics-informed outbreak investigations of SARS-CoV-2 using civet Áine O’Toole, Verity Hill, Ben Jackson, Rebecca Dewar, Nikita Sahadeo, Rachel Colquhoun, Stefan Rooke, J. T. McCrone, Kate Duggan, Martin Patrick McHugh, Samuel M. Nicholls, Radoslaw Poplawski, The COVID-19 Genomics UK (COG-UK) Consortium, COVID-19 Impact Project (Trinidad & Tobago Group), David Aanensen, Matt Holden, Tom Connor, Nick Loman, Ian Goodfellow, Christine V. F. Carrington, Kate Templeton, Andrew Rambaut
PLOS Global Public Health 2022 vol. 2
Automated Remote Pulse Oximetry System (ARPOS) David Morrison, Gayle Helane Doherty, Devesh J Dhasmana, David Cameron Christopher Harris-Birtill
Sensors 2022 vol. 21
Automated Remote Pulse Oximetry System (ARPOS) Methodology and Protocol David Morrison, Gayle Helane Doherty, Devesh J Dhasmana, David Cameron Christopher Harris-Birtill
2022
Indirect protection by reducing transmission Aaron Richterman, Eric A Meyerowitz, Muge Cevik
Open Forum Infectious Diseases 2022 vol. 9
An evaluation of global Chikungunya clinical management guidelines Eika Webb, Melina Michelen, Ishmeala Rigby, Andrew Dagens, Dania Dahmash, Vincent Cheng, Reena Joseph, Samuel Lipworth, Eli Harriss, Erhui Cai, Robert Nartowski, Pande Putu Januraga, Keerti Gedela, Evi Sukmaningrum, Muge Cevik, Helen Groves, Peter Hart, Tom Fletcher, Lucille Blumberg, Peter W Horby, Shevin T Jacob, Louise Sigfrid
EClinicalMedicine 2022 vol. 54
Availability, scope and quality of monkeypox clinical management guidelines globally Eika Webb, Ishmeala Rigby, Melina Michelen, Andrew Dagens, Vincent Cheng, Amanda M Rojek, Dania Dahmash, Susan Khader, Keerti Gedela, Alice Norton, Muge Cevik, Erhui Cai, Eli Harriss, Samuel Lipworth, Robert Nartowski, Helen Groves, Peter Hart, Lucille Blumberg, Tom Fletcher, Shevin T Jacob, Louise Sigfrid, Peter W Horby
BMJ Global Health 2022 vol. 7
SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway Brian J. Willett, Joe Grove, Oscar A. MacLean, Craig Wilkie, Giuditta De Lorenzo, Wilhelm Furnon, Diego Cantoni, Sam Scott, Nicola Logan, Shirin Ashraf, Maria Manali, Agnieszka Szemiel, Vanessa Cowton, Elen Vink, William T. Harvey, Chris Davis, Patawee Asamaphan, Katherine Smollett, Lily Tong, Richard Orton, Joseph Hughes, Poppy Holland, Vanessa Silva, David J. Pascall, Kathryn Puxty, Ana da Silva Filipe, Gonzalo Yebra, Sharif Shaaban, Matthew Holden, Rute Maria Pinto, Rory Gunson, Kate Templeton, Pablo R. Murcia, Arvind H. Patel, Paul Klenerman, Susanna Dunachie, John Haughney, David L. Robertson, Massimo Palmarini, Surajit Ray, Emma C. Thomson
Nature Microbiology 2022 vol. First Online
The genus Serratia revisited by genomics David J. Williams, Patrick A. D. Grimont, Adrián Cazares, Francine Grimont, Elisabeth Ageron, Kerry Andrea Pettigrew, Daniel Cazares, Elisabeth Njamkepo, François-Xavier Weill, Eva Heinz, Matthew Holden, Nicholas R. Thomson, Sarah J. Coulthurst
Nature Communications 2022 vol. 13
Extracting and classifying salient fields of view from microscopy slides of tuberculosis bacteria Oggie Arandelovic, Evelin Dombay, Wilber Sabiiti, Derek James Sloan
2022 pp. 146–157
Tuberculosis bacteria detection and counting in fluorescence microscopy images using a multi-stage deep learning pipeline Oggie Arandelovic, Wilber Sabiiti, Derek James Sloan
Information 2022 vol. 13
Aspirin in patients admitted to hospital with COVID-19 (RECOVERY) Devesh J Dhasmana, Peter W Hornby, Martin J Landray
Lancet 2022 vol. 399 pp. 143-151
Casirivimab and imdevimab in patients admitted to hospital with COVID-19 (RECOVERY) Devesh J Dhasmana, Peter W Horby, Martin J Landray
The Lancet 2022 vol. 399 pp. 665-676
Effect of noninvasive respiratory strategies on intubation or mortality among patients with acute hypoxemic respiratory failure and COVID-19 Gavin D Perkins, Chen Ji, Bronwen A Connolly, Keith Couper, Ranjit Lall, J Kenneth Baillie, Judy M Bradley, Paul Dark, Chirag Dave, Anthony De Soyza, Anna V Dennis, Anne Devrell, Sara Fairbairn, Hakim Ghani, Ellen A Gorman, Christopher A Green, Nicholas Hart, Siew Wan Hee, Zoe Kimbley, Shyam Madathil, Nicola McGowan, Benjamin Messer, Jay Naisbitt, Chloe Norman, Dhruv Parekh, Emma M Parkin, Jaimin Patel, Scott E Regan, Clare Ross, Anthony J Rostron, Mohammad Saim, Anita K Simonds, Emma Skilton, Nigel Stallard, Michael Steiner, Rama Vancheeswaran, Joyce Yeung, Daniel F McAuley, Devesh J Dhasmana
JAMA - Journal of the American Medical Association 2022 vol. 327 pp. 546-558
Essential features of an interstitial lung disease multidisciplinary meeting Alan K Y Teoh, Anne E Holland, Julie Morisset, Kevin R Flaherty, Athol U Wells, Simon L F Walsh, Ian Glaspole, Wim A Wuyts, Tamera J Corte, Devesh J Dhasmana
Annals of the American Thoracic Society 2022 vol. 19 pp. 66-73
Protection against SARS-CoV-2 after Covid-19 vaccination and previous infection Victoria Hall, Sarah Foulkes, Ferdinando Insalata, Peter Kirwan, Ayoub Saei, Ana Atti, Edgar Wellington, Jameel Khawam, Katie Munro, Michelle Cole, Caio Tranquillini, Andrew Taylor-Kerr, Nipunadi Hettiarachchi, Davina Calbraith, Noshin Sajedi, Iain Milligan, Yrene Themistocleous, Diane Corrigan, Lisa Cromey, Lesley Price, Sally Stewart, Elen de Lacy, Chris Norman, Ezra Linley, Ashley D Otter, Amanda Semper, Jacqueline Hewson, Silvia D'Arcangelo, Meera Chand, Colin S Brown, Tim Brooks, Jasmin Islam, Andre Charlett, Susan Hopkins, Devesh J Dhasmana
New England Journal of Medicine 2022 vol. 386 pp. 1207-1220
Cataract surgery redesign Kim Lawrence Ah-See, Andrew Blaikie, Natalie Boyle, Jonathan Foulds, Catherine Wheeldon, Peter Wilson, Caroline Styles, Shona Sutherland, Roshini Sanders
Clinical Ophthalmology 2021 vol. 15 pp. 289—297
Eyecare education in times of COVID-19 Martin Anderson, Karsten Paust, Andrew Blaikie
Eye News 2021 vol. 27
Will Africans take COVID-19 vaccination? AbdulAzeez A Anjorin, Ismail A Odetokun, Ajibola I Abioye, Hager Elnadi, Mfon Valencia Umoren, Bamu F Damaris, Joseph Eyedo, Haruna I Umar, Jean B Nyandwi, Mena M Abdalla, Sodiq O Tijani, Kwame S Awiagah, Gbolahan A Idowu, Sifeuh N Achille Fabrice, Aala M O Maisara, Youssef Razouqi, Zuhal E Mhgoob, Salim Parker, Osaretin E Asowata, Ismail O Adesanya, Maureen A Obara, Shameem Jaumdally, Taofik A Okuneye, Kennedy M Mbanzulu, Hajj Daitoni, Ezekiel F Hallie, Rasha Mosbah, Folorunso O Fasina
PLoS ONE 2021 vol. 16
Human papillomavirus detection by whole-genome next-generation sequencing Laila Sara Arroyo Mühr, Kate Cuschieri, Karin Sundström
Viruses 2021 vol. 13
Protocol for an interdisciplinary cross-sectional study investigating the social, biological and community-level drivers of antimicrobial resistance (AMR) Benon Asiimwe, John Kiiru, Stephen Mshana, Stella Neema, Katherine Lisa Keenan, Mike Kesby, Joseph R. Mwanga, Derek James Sloan, Blandina T. Mmbaga, V Anne Smith, Stephen Henry Gillespie, Andy Lynch, Alison Fiona Sandeman, John Stelling, Alison Elliott, David M. Aanensen, Gibson E. Kibiki, Wilber Sabiiti, Matthew Holden,
BMJ Open 2021 vol. 11
Comparative evaluation of a low-cost solar powered otoscope with a traditional device among health care workers in Malawi Katharine Balfour, Amy McCarthy, Shi Ying Hey, Obaid Kousha, Emmanuel Singano, Wakisa Mulwafu, David F. D. L. Walker, Andrew Blaikie
Laryngoscope Investigative Otolaryngology 2021 vol. 6 pp. 839-843
Complete genome for Actinobacillus pleuropneumoniae serovar 8 reference strain 405 Janine T. Bossé, Yanwen Li, Liza Miriam Cohen, Marc Stegger, Øystein Angen, Sonia Lacouture, Marcelo Gottschalk, Liancheng Lei, Miriam Koene, Peter Kuhnert, Aloka B. Bandara, Thomas J. Inzana, Matthew Holden, David Harris, Olusegun Oshota, Duncan J. Maskell, Alexander W. Tucker, Brendan W. Wren, Andrew N. Rycroft, Paul R. Langford,
Microbial Genomics 2021 vol. 7
Rationally designed mariner vectors for functional genomic analysis of Actinobacillus pleuropneumoniae and other Pasteurellaceae species by transposon-directed insertion-site sequencing (TraDIS) Janine T. Bossé, Yanwen Li, Leon G. Leanse, Liqing Zhou, Roy R. Chaudhuri, Sarah E. Peters, Jinhong Wang, Gareth A. Maglennon, Matthew Holden, Duncan J. Maskell, Alexander W. Tucker, Brendan W. Wren, Andrew N. Rycroft, Paul R. Langford, Alexander W. (. Dan) Tucker, Lucy A. Weinert, Jinhong (. Tracy) Wang, Shi-Lu Luan, Jessica Beddow, Jon Cuccui, Vanessa S. Terra, on behalf of the BRaDP1T consortium
Animal Diseases 2021 vol. 1
COVID-19 vaccines Muge Cevik, Nathan D. Grubaugh, Akiko Iwasaki, Peter Openshaw
Cell 2021
Gender disparities in coronavirus disease 2019 clinical trial leadership Muge Cevik, Syed Arefinul Haque, Jennifer Manne-Goehler, Krutika Kuppalli, Paul E Sax, Maimuna S Majumder, Chloe Orkin
Clinical Microbiology and Infection 2021 vol. 27 pp. 1007-1010
Networks of SARS-CoV-2 transmission Muge Cevik, Stefan D. Baral
Science 2021 pp. 162-163
Prevalence of asymptomatic SARS-CoV-2 infection Muge Cevik, Isaac I. Bogoch, Gail Carson, Eric D’Ortenzio, Krutika Kuppalli
Annals of Internal Medicine 2021 vol. 174 pp. 283-284
SARS-CoV-2 variants and considerations of inferring causality on disease severity Muge Cevik, Sharmistha Mishra
The Lancet Infectious Diseases 2021
SARS-CoV-2, SARS-CoV, and MERS-CoV viral load dynamics, duration of viral shedding, and infectiousness Muge Cevik, Matthew Tate, Ollie Lloyd, Alberto Enrico Maraolo, Jenna Schafers, Antonia Ho
The Lancet Microbe 2021 vol. 2 pp. e13-e22
Support for self-isolation is critical in covid-19 response Muge Cevik, Stefan D. Baral, Alex Crozier, Jackie A. Cassell
British Medical Journal 2021 vol. 372
Cataract risk stratification and prioritisation protocol in the COVID-19 era Kelvin Cheng, Martin Anderson, S. Velissaris, Robert Berkeley Reynolds Moreton, Ahmed Al-Mansour, Roshini Sanders, Shona Sutherland, Peter Wilson, Andrew Blaikie
BMC Health Services Research 2021 vol. 21
Genomic surveillance of Acinetobacter baumannii in the Philippines, 2013-2014 J Chilam, S Argimon, MT Limas, ML Masim, JM Gayeta, ML Lagrada, AM Olorosa, V Cohen, LT Hernandez, B Jeffrey, K Abudahab, CM Hufano, SB Sia, Matthew Holden, J Stelling, DM Aanensen, CC Carlos,
Western Pacific Surveillance and Response Journal 2021 vol. 12
Expect the unexpected – implications for next phase of COVID-19 response Sarah Clifford, Muge Cevik, Robyn Campbell, Dàire O’Shea, Rebecca Sutherland
Infection Prevention in Practice 2021 vol. 3
Evaluation of the molecular detection of ciprofloxacin resistance in Neisseria gonorrhoeae by the ResistancePlus GC assay (SpeeDx) Seb Cotton, Martin Patrick McHugh, Michelle Etherson, Jill Shepherd, Kate E Templeton
Diagnostic microbiology and infectious disease 2021 vol. 99
Pan-resistome characterization of uropathogenic Escherichia coli and Klebsiella pneumoniae strains circulating in Uganda and Kenya, isolated from 2017-2018 Arun Decano, Kerry Andrea Pettigrew, Wilber Sabiiti, Derek James Sloan, Stella Neema, Joel Bazira, John Kiiru, Helen Atieno Onyango, Benon Asiimwe, Matthew Holden
Antibiotics 2021 vol. 10
Aims and challenges of building national trainee networks in clinical microbiology and infectious disease disciplines Sarah Dellière, Nathan Peiffer-Smadja, Maria João-Lopes, Muge Cevik, Maxime Pichon, Alexandre Bleibtreu, Valentijn Schweitzer, Katharina Last, Théo G Ferreira, Adrien Lemaignen, Aleksandra Barac
Future Microbiology 2021 vol. Epub ahead of print
Outcomes of COVID-19 related hospitalization among people with HIV in the ISARIC WHO Clinical Characterization Protocol (UK) Anna Maria Geretti, Alexander J Stockdale, Sophie H Kelly, Muge Cevik, Simon Collins, Laura Waters, Giovanni Villa, Annemarie Docherty, Ewen M Harrison, Lance Turtle, Peter J M Openshaw, J Kenneth Baillie, Caroline A Sabin, Malcolm G Semple
Clinical Infectious Diseases 2021 vol. 73 pp. e2095-e2106
Genomic analysis of global Staphylococcus argenteus strains reveals distinct lineages with differing virulence and antibiotic resistance gene content Cosmika Goswami, Stephen Fox, Matthew Holden, Alistair Leanord, Thomas J Evans
Frontiers in Microbiology 2021 vol. 12
The role of multidimensional poverty in antibiotic misuse Dominique LaShari Green, Katherine Lisa Keenan, Sarah Insia Huque, Mike Kesby, Martha F. Mushi, Catherine Kansiime, Benon Asiimwe, John Kiiru, Stephen Mshana, Stella Neema, Joseph R. Mwanga, Andy Lynch, Hannah Worthington, Emmanuel Olawale Olamijuwon, Mary Abed Al Ahad, Annette Aduda, Blandina T. Mmbaga, Joel Bazira, Alison Fiona Sandeman, John Stelling, Stephen Henry Gillespie, Gibson Kibiki, Wilber Sabiti, Derek James Sloan, Matthew Holden, Hatua Consortium
2021
Comparative yield of tuberculosis during active case finding 2 using GeneXpert or smear microscopy for diagnostic testing 3 in Nepal Suman Chandra Gurung, Kritika Dixit, Bhola Rai, Raghu Dhital, Puskar Raj Paudel, Shraddha Acharya, Gangaram Budhathoki, Deepak Malla, Jen W. Levy, Knut Lönnroth, Andrew Ramsay, Buddha Basnyat, Anil Thapa, Gokul Mishra, Bishal Subedi, Kashim Shah, Anil Shrestha, Maxine Caws
Tropical Medicine and Infectious Disease 2021 vol. 6
How to reduce household costs for people with tuberculosis Suman Chandra Gurung, Bhola Rai, Kritika Dixit, Eve Worrall, Puskar Raj Paudel, Raghu Dhital, Manoj Kumar Sah, Ram Narayan Pandit, Tara Prasad Aryal, Govinda Majhi, Tom Wingfield, Bertie Squire, Knut Lönnroth, Jens W Levy, Kerri Viney, Job van Rest, Andrew Ramsay, Rafaely Marcia Santos da Costa, Buddha Basnyat, Anil Thapa, Gokul Mishra, Julia Moreira Pescarini, Maxine Caws, Noemia Teixeira de Siqueira-Filha
Health Policy and Planning 2021 vol. 36 pp. 594-605
Genomic surveillance of Neisseria gonorrhoeae in the Philippines, 2013-2014 Manuel C Jamoralin, Silvia Argimón, Marietta L Lagrada, Alfred S Villamin, Melissa L Masim, June M Gayeta, Karis D Boehme, Agnettah M Olorosa, Sonia B Sia, Charmian M Hufano, Victoria Cohen, Lara T Hernandez, Benjamin Jeffrey, Khalil Abudahab, John Stelling, Matthew Holden, David M Aanensenb, Celia C Carlosa
Western Pacific Surveillance and Response Journal 2021 vol. 12 pp. 17-25
The appointment system influences uptake of cataract surgical services in Rwanda Priya Morjaria, Wanjiku Mathenge, Jacqueline Ramke
International Journal of Environmental Research and Public Health 2021 vol. 18
Perspectives for systems biology in the management of tuberculosis I. Kontsevaya, C. Lange, P. Comella-Del-Barrio, C. Coarfa, A.R. DiNardo, Stephen Henry Gillespie, M. Hauptmann, C. Leschczyk, A.M. Mandalakas, A. Martinecz, M. Merker, S. Niemann, M. Reimann, O. Rzhepishevska, U.E. Schaible, K.M. Scheu, E. Schurr, P. Abel Zur Wiesch, J. Heyckendorf
European Respiratory Review 2021 vol. 30
Comparative evaluation of a new frugal binocular indirect ophthalmoscope Obaid Kousha, Sharma Ganesananthan, Bayan Shahin, John Ellis, Andrew Blaikie
Eye 2021 vol. Advance Access
Frugal retinal laser training simulation eyes Obaid Kousha, Blazej Staniszewski, Juan Lopez Ulloa, Sonali Tarafdar, John Ellis, Andrew Blaikie
Eye 2021
Mycobactericidal effect of different regimens measured by molecular bacterial load assay among people treated for multidrug-resistant tuberculosis in Tanzania Peter M. Mbelele, Emmanuel A. Mpolya, Elingarami Sauli, Bariki Mtafya, Nyanda E. Ntinginya, Kennedy K. Addo, Katharina Kreppel, Sayoki Mfinanga, Patrick P.J. Phillips, Stephen Henry Gillespie, Scott K. Heysell, Wilber Sabiiti, Stellah G. Mpagama
Journal of Clinical Microbiology 2021 vol. 59
Qualitative assessment of the impact of socioeconomic and cultural barriers on uptake and utilisation of tuberculosis diagnostic and treatment tools in East Africa Elizabeth F. Msoka, Fred Orina, Erica Sanga, Barbara Miheso, Simeon Mwanyonga, Helen Meme, Kiula Kiula, Alphonce Liyoyo, Ivan Mwebaza, Augustus Aturinde, Moses Joloba, Blandina Theophil Mmbaga, Evans Amukoye, Nyanda Elias Ntinginya, Stephen Henry Gillespie, Wilber Sabiiti
BMJ Open 2021 vol. 11
COVID-19, children and schools Alasdair Munro, Asha C Bowen, Muge Cevik
Medical Journal of Australia 2021 vol. 214 pp. 188-188.e1
Reproducibility of the ribosomal RNA synthesis ratio in sputum and association with markers of mycobacterium tuberculosis burden Emmanuel Musisi, Christian Dide-Agossou, Reem Al Mubarak, Karen Rossmassler, Abdul Wahab Ssesolo, Sylvia Kaswabuli, Patrick Byanyima, Ingvar Sanyu, Josephine Zawedde, William Worodria, Martin I Voskuil, Rada M Savic, Payam Nahid, J Lucian Davis, Laurence Huang, Camille M Moore, Nicholas D Walter
Microbiology Spectrum 2021 vol. 9

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